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We present a simple tool for extracting text and markup information from printouts of (not only) scientific documents. While the heavy-lifting OCR is done by off-the-shelf tesseract, our focus is on detection, extraction, and basic categorization of color-highlighted text sections, as well as on providing a framework for downstream processing of extraction results. The tool can be useful for document analysis tasks that must, or benefit from being able to, use printed paper.
We introduce a novel scientific document processing task for making previously inaccessible information in printed paper documents available to automatic processing. We describe our data set of scanned documents and data records from the biological database SABIO-RK, provide a definition of the task, and report findings from preliminary experiments. Rigorous evaluation proved challenging due to lack of gold-standard data and a difficult notion of correctness. Qualitative inspection of results, however, showed the feasibility and usefulness of the task.